RDDataManip Namespace Reference

Classes
class	MetricMatrixCalc
	A generic metric matrix calculator (e.g similarity matrix or distance matrix). More...
Functions
template<typename T1 , typename T2 >
double	EuclideanDistanceMetric (const T1 &v1, const T2 &v2, unsigned int dim)
	return the Euclidean distance between two vectors
template<typename T1 , typename T2 >
double	TanimotoDistanceMetric (const T1 &bv1, const T2 &bv2, unsigned int dim)
	return the Tanimoto distance (1-TanimotoSimilarity) between two bit vectors
template<typename T1 , typename T2 >
double	TanimotoSimilarityMetric (const T1 &bv1, const T2 &bv2, unsigned int dim)
	return the Tanimoto similarity between two bit vectors

---

Function Documentation

template<typename T1 , typename T2 >

double RDDataManip::EuclideanDistanceMetric	(	const T1 &	v1,
		const T2 &	v2,
		unsigned int	dim
	)

return the Euclidean distance between two vectors

Definition at line 17 of file MetricFuncs.h.

template<typename T1 , typename T2 >

double RDDataManip::TanimotoDistanceMetric	(	const T1 &	bv1,
		const T2 &	bv2,
		unsigned int	dim
	)

return the Tanimoto distance (1-TanimotoSimilarity) between two bit vectors

Definition at line 31 of file MetricFuncs.h.

References SimilarityWrapper(), and TanimotoSimilarity().

template<typename T1 , typename T2 >

double RDDataManip::TanimotoSimilarityMetric	(	const T1 &	bv1,
		const T2 &	bv2,
		unsigned int	dim
	)

return the Tanimoto similarity between two bit vectors

Definition at line 39 of file MetricFuncs.h.

References SimilarityWrapper(), and TanimotoSimilarity().