Package rdkit :: Package Chem :: Module Descriptors
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Module Descriptors

source code

Functions [hide private]
 
_isCallable(thing) source code
 
_setupDescriptors(namespace) source code
 
MolWt(*x, **y)
The average molecular weight of the molecule ignoring hydrogens
source code
 
HeavyAtomMolWt(x)
The average molecular weight of the molecule ignoring hydrogens
source code
 
NumValenceElectrons(mol)
The number of valence electrons the molecule has
source code
 
_pyMolecularFormula(mol)
DEPRECATED: this is now implemented in C++ Return the molecular formula
source code
 
MolecularFormula(x) source code
 
_test() source code
Variables [hide private]
  _descList = [('MolWt', <function <lambda> at 0x1b8d8c0>), ('He...
  __package__ = 'rdkit.Chem'
  descList = [('MolWt', <function <lambda> at 0x1b8d8c0>), ('Hea...

Imports: Chem, collections, _rdMolDescriptors, BalabanJ, BertzCT, Chi0, Chi0n, Chi0v, Chi1, Chi1n, Chi1v, Chi2n, Chi2v, Chi3n, Chi3v, Chi4n, Chi4v, EState_VSA1, EState_VSA10, EState_VSA11, EState_VSA2, EState_VSA3, EState_VSA4, EState_VSA5, EState_VSA6, EState_VSA7, EState_VSA8, EState_VSA9, HallKierAlpha, HeavyAtomCount, Ipc, Kappa1, Kappa2, Kappa3, LabuteASA, MolLogP, MolMR, NHOHCount, NOCount, NumHAcceptors, NumHDonors, NumHeteroatoms, NumRotatableBonds, PEOE_VSA1, PEOE_VSA10, PEOE_VSA11, PEOE_VSA12, PEOE_VSA13, PEOE_VSA14, PEOE_VSA2, PEOE_VSA3, PEOE_VSA4, PEOE_VSA5, PEOE_VSA6, PEOE_VSA7, PEOE_VSA8, PEOE_VSA9, RingCount, SMR_VSA1, SMR_VSA10, SMR_VSA2, SMR_VSA3, SMR_VSA4, SMR_VSA5, SMR_VSA6, SMR_VSA7, SMR_VSA8, SMR_VSA9, SlogP_VSA1, SlogP_VSA10, SlogP_VSA11, SlogP_VSA12, SlogP_VSA2, SlogP_VSA3, SlogP_VSA4, SlogP_VSA5, SlogP_VSA6, SlogP_VSA7, SlogP_VSA8, SlogP_VSA9, TPSA, VSA_EState1, VSA_EState10, VSA_EState2, VSA_EState3, VSA_EState4, VSA_EState5, VSA_EState6, VSA_EState7, VSA_EState8, VSA_EState9, fr_Al_COO, fr_Al_OH, fr_Al_OH_noTert, fr_ArN, fr_Ar_COO, fr_Ar_N, fr_Ar_NH, fr_Ar_OH, fr_COO, fr_COO2, fr_C_O, fr_C_O_noCOO, fr_C_S, fr_HOCCN, fr_Imine, fr_NH0, fr_NH1, fr_NH2, fr_N_O, fr_Ndealkylation1, fr_Ndealkylation2, fr_Nhpyrrole, fr_SH, fr_aldehyde, fr_alkyl_carbamate, fr_alkyl_halide, fr_allylic_oxid, fr_amide, fr_amidine, fr_aniline, fr_aryl_methyl, fr_azide, fr_azo, fr_barbitur, fr_benzene, fr_benzodiazepine, fr_bicyclic, fr_diazo, fr_dihydropyridine, fr_epoxide, fr_ester, fr_ether, fr_furan, fr_guanido, fr_halogen, fr_hdrzine, fr_hdrzone, fr_imidazole, fr_imide, fr_isocyan, fr_isothiocyan, fr_ketone, fr_ketone_Topliss, fr_lactam, fr_lactone, fr_methoxy, fr_morpholine, fr_nitrile, fr_nitro, fr_nitro_arom, fr_nitro_arom_nonortho, fr_nitroso, fr_oxazole, fr_oxime, fr_para_hydroxylation, fr_phenol, fr_phenol_noOrthoHbond, fr_phos_acid, fr_phos_ester, fr_piperdine, fr_piperzine, fr_priamide, fr_prisulfonamd, fr_pyridine, fr_quatN, fr_sulfide, fr_sulfonamd, fr_sulfone, fr_term_acetylene, fr_tetrazole, fr_thiazole, fr_thiocyan, fr_thiophene, fr_unbrch_alkane, fr_urea


Function Details [hide private]

MolWt(*x, **y)

source code 
The average molecular weight of the molecule ignoring hydrogens

>>> MolWt(Chem.MolFromSmiles('CC'))
30.07...
>>> MolWt(Chem.MolFromSmiles('[NH4+].[Cl-]'))
53.49...

HeavyAtomMolWt(x)

source code 
The average molecular weight of the molecule ignoring hydrogens

>>> HeavyAtomMolWt(Chem.MolFromSmiles('CC'))
24.02...
>>> HeavyAtomMolWt(Chem.MolFromSmiles('[NH4+].[Cl-]'))
49.46...

NumValenceElectrons(mol)

source code 
The number of valence electrons the molecule has

>>> NumValenceElectrons(Chem.MolFromSmiles('CC'))
14.0
>>> NumValenceElectrons(Chem.MolFromSmiles('C(=O)O'))
18.0
>>> NumValenceElectrons(Chem.MolFromSmiles('C(=O)[O-]'))
18.0
>>> NumValenceElectrons(Chem.MolFromSmiles('C(=O)'))
12.0

_pyMolecularFormula(mol)

source code 
DEPRECATED: this is now implemented in C++
Return the molecular formula

contribution from Andrew Dalke


Variables Details [hide private]

_descList

Value:
[]

descList

Value:
[]