RDKit
Open-source cheminformatics and machine learning.
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RDKit::MolEnumerator Namespace Reference

Namespaces

namespace  detail
 
namespace  utils
 

Classes

struct  LinkNode
 
class  LinkNodeOp
 Molecule enumeration operation corresponding to LINKNODES. More...
 
class  MolEnumeratorOp
 abstract base class for the a molecule enumeration operation More...
 
struct  MolEnumeratorParams
 Parameters used to control the molecule enumeration. More...
 
class  PositionVariationOp
 Molecule enumeration operation corresponding to position variation bonds. More...
 
class  RepeatUnitOp
 Molecule enumeration operation corresponding to SRUs. More...
 

Functions

RDKIT_MOLENUMERATOR_EXPORT MolBundle enumerate (const ROMol &mol, const std::vector< MolEnumeratorParams > &paramsList)
 
RDKIT_MOLENUMERATOR_EXPORT MolBundle enumerate (const ROMol &mol, size_t maxPerOperation=0)
 
MolBundle enumerate (const ROMol &mol, const MolEnumeratorParams &params)
 

Function Documentation

◆ enumerate() [1/3]

MolBundle RDKit::MolEnumerator::enumerate ( const ROMol & mol,
const MolEnumeratorParams & params )
inline

Returns a MolBundle containing the molecules resulting from applying the operator contained in params to mol.

Definition at line 275 of file MolEnumerator.h.

References enumerate().

◆ enumerate() [2/3]

RDKIT_MOLENUMERATOR_EXPORT MolBundle RDKit::MolEnumerator::enumerate ( const ROMol & mol,
const std::vector< MolEnumeratorParams > & paramsList )

Returns a MolBundle containing the molecules resulting from applying the operators contained in paramsLists to mol. the operators are applied in order

NOTE: the current implementation does not support molecules which include both LINKNODE and SRU features.

Referenced by enumerate().

◆ enumerate() [3/3]

RDKIT_MOLENUMERATOR_EXPORT MolBundle RDKit::MolEnumerator::enumerate ( const ROMol & mol,
size_t maxPerOperation = 0 )

Returns a MolBundle containing the molecules resulting from applying the enumerable operators contained in mol.

Parameters
maxPerOperationthe maximum number of molecules which an individual operation is allowed to generate

NOTE: the current implementation does not support molecules which include both LINKNODE and SRU features.