RDKit
Open-source cheminformatics and machine learning.
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EnumerateTypes.h
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//
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// Copyright (c) 2015, Novartis Institutes for BioMedical Research Inc.
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// All rights reserved.
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//
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// Redistribution and use in source and binary forms, with or without
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// modification, are permitted provided that the following conditions are
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// met:
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//
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// * Redistributions of source code must retain the above copyright
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// notice, this list of conditions and the following disclaimer.
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// * Redistributions in binary form must reproduce the above
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// copyright notice, this list of conditions and the following
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// disclaimer in the documentation and/or other materials provided
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// with the distribution.
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// * Neither the name of Novartis Institutes for BioMedical Research Inc.
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// nor the names of its contributors may be used to endorse or promote
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// products derived from this software without specific prior written
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// permission.
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//
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// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
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// "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
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// LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
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// A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
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// OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
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// SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
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// LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
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// DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
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// THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
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// (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
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// OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
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//
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#include <
RDGeneral/export.h
>
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#ifndef ENUMERATETYPES_H
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#define ENUMERATETYPES_H
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#include <
GraphMol/RDKitBase.h
>
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namespace
RDKit
{
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namespace
EnumerationTypes {
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//! BBS - Helper typedef for holding building blocks for reactions
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//! holds vectors of reagents for each reactant in a Reaction
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typedef
std::vector<MOL_SPTR_VECT>
BBS
;
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//! RGROUPS Helper typedef for indexing into the BBS vector
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//! - The indices into the BBS molecule list to create a product
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//! Example
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//! RGROUPS groups;
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//! groups.push_back(10);
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//! groups.push_back(5);
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//!
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//! Will create a product from the following building blocks:
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//! MOL_SPTR_VECT building_blocks;
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//! building_blocks.push_back( BBS[0][groups[0] );
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//! building_blocks.push_back( BBS[1][groups[1] );
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//! rxn.runReactants( building_blocks );
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typedef
std::vector<boost::uint64_t>
RGROUPS
;
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}
// namespace EnumerationTypes
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}
// namespace RDKit
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#endif
RDKitBase.h
pulls in the core RDKit functionality
export.h
RDKit::EnumerationTypes::RGROUPS
std::vector< boost::uint64_t > RGROUPS
Definition
EnumerateTypes.h:56
RDKit::EnumerationTypes::BBS
std::vector< MOL_SPTR_VECT > BBS
Definition
EnumerateTypes.h:42
RDKit
Std stuff.
Definition
Abbreviations.h:19
GraphMol
ChemReactions
Enumerate
EnumerateTypes.h
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