RDDataManip Namespace Reference

Classes
class	MetricMatrixCalc
	A generic metric matrix calculator (e.g similarity matrix or distance matrix) More...

Functions
template<typename T1, typename T2>
double	EuclideanDistanceMetric (const T1 &v1, const T2 &v2, unsigned int dim)
	return the Euclidean distance between two vectors
template<typename T1, typename T2>
double	TanimotoDistanceMetric (const T1 &bv1, const T2 &bv2, unsigned int dim)
	return the Tanimoto distance (1-TanimotoSimilarity) between two bit vectors
template<typename T1, typename T2>
double	TanimotoSimilarityMetric (const T1 &bv1, const T2 &bv2, unsigned int dim)
	return the Tanimoto similarity between two bit vectors

Function Documentation

EuclideanDistanceMetric()

template<typename T1, typename T2>

double RDDataManip::EuclideanDistanceMetric	(	const T1 &	v1,
		const T2 &	v2,
		unsigned int	dim )

return the Euclidean distance between two vectors

Definition at line 20 of file MetricFuncs.h.

TanimotoDistanceMetric()

template<typename T1, typename T2>

double RDDataManip::TanimotoDistanceMetric	(	const T1 &	bv1,
		const T2 &	bv2,
		unsigned int	dim )

return the Tanimoto distance (1-TanimotoSimilarity) between two bit vectors

Definition at line 34 of file MetricFuncs.h.

References RDUNUSED_PARAM, SimilarityWrapper(), and TanimotoSimilarity().

TanimotoSimilarityMetric()

template<typename T1, typename T2>

double RDDataManip::TanimotoSimilarityMetric	(	const T1 &	bv1,
		const T2 &	bv2,
		unsigned int	dim )

return the Tanimoto similarity between two bit vectors

Definition at line 46 of file MetricFuncs.h.

References RDUNUSED_PARAM, SimilarityWrapper(), and TanimotoSimilarity().